The impacts of cattle access points on deposited sediment levels in headwater streams in Ireland

Cattle access to streams has been linked globally with degradation of stream water quality, driven largely by bank erosion and resultant instream, fine sediment deposition. The majority of evidence on such effects is however based in arid and semiarid regions of the United States and Australia, with few studies relating to cool temperate climates such as Northwest Europe. In this study, “Quorer” resuspendable sediment samples were taken from riffle geomorphic units upstream (control) and at two points downstream (pressure and recovery) of cattle access points in headwater streams in agricultural catchments in Ireland to assess levels of deposited stream sediment. Samples were taken in April/May (2016) prior to the grazing season and in October (2016) at the end of the grazing season. Sites in good‐high ecological status catchments and less than good ecological status catchments were included in the study. Higher levels of sediment were found downstream of cattle access points in both good‐high status and less than good status catchments; however, the impacts of access points were spatially confined to, in most cases, the area immediately downstream of the point of access. There was a strong correlation between deposited sediment mass and organic matter (OM) mass, with levels of OM increasing linearly with deposited sediment mass. Levels of measured sediment were negatively correlated with riparian habitat health (measured using a qualitative habitat assessment). The results of this study highlight the need for measures to prevent cattle access to headwater streams where access points can be many in order to manage local habitat quality and downstream water quality issues.     

Characterizing physical habitat preferences and thermal refuge occupancy of brook trout (Salvelinus fontinalis) and Atlantic salmon (Salmo salar) at high river temperatures

Anthropogenic influences, including climate change, are increasing river temperatures in northern and temperate regions and threatening the thermal habitats of native salmonids. When river temperatures exceed the tolerance levels of brook trout and Atlantic salmon, individuals exhibit behavioural thermoregulation by seeking out cold‐water refugia – often created by tributaries and groundwater discharge. Thermal infrared (TIR) imagery was used to map cold‐water anomalies along a 53 km reach of the Cains River, New Brunswick. Trout and salmon parr did not use all identified thermal anomalies as refugia during higher river temperature periods (>21°C). Most small‐bodied trout (8–30 cm) were observed in 80% of the thermal anomalies sampled. Large‐bodied trout (>35 cm) required a more specific set of physical habitat conditions for suitable refugia, that is, 100% of observed large trout used 30% of the anomalies sampled and required water depths >65 cm within or adjacent to the anomaly. Densities of trout were significantly higher within anomalies compared with areas of ambient river temperature. Salmon parr were less aligned with thermal anomalies at the observed temperatures, that is, 59% were found in 65% of the sampled anomalies; and densities were not significantly different within/ outside anomalies. Salmon parr appeared to aggregate at 27°C, and after several events over 27°C variability in aggregation behaviour was observed – some fish aggregated at 25°C, others did not. We stipulate this is due to variances of thermal fatigue. Habitat suitability curves were developed for velocity, temperature, depth, substrate, and deep water availability to characterize conditions preferred by fish during high‐temperature events. These findings are useful for managers as our climate warms, and can potentially be used as a tool to help conserve and enhance thermal refugia for brook trout and Atlantic salmon in similar systems.     

Impact of dams on point bar habitat: a case for the extirpation of the Sacramento Valley Tiger Beetle,C. hirticollis abrupta

Quantitative analyses of flow and stage data, remote sensing and geographic information systems analysis, and field studies were used to assess the impact of dams and diversions on the point bar habitat of the Sacramento Valley Tiger Beetle (Cicindela hirticollis abrupta). The reaches of interest include sites of known historic populations of C. h. abrupta along the Sacramento River from approximately 8 km north of Colusa southward to the confluence with the Feather River and along the Feather River between Yuba City and its confluence with the Sacramento River. The results from this study show that construction of two major dams has altered flows such that prolonged and increased flows during summer, fall, and early winter have most likely disrupted life cycles, flooded larvae, drowned overwintering adults and led to high mortality. Additionally, habitat availability has decreased over time because point bars have decreased in number and area causing increased distances between populations and isolation of populations. Moreover, point bar armouring, channel scouring, altered flows, redirected flows through weirs, and lithologic controls have produced a bimodal distribution of mean grain sizes in the Sacramento River in which the more northern bars contain gravel deposits and more southern bars possess fine sands. These conditions negatively alter moisture retention and sediment compaction and, consequently, burrowing conditions needed by this tiger beetle. Additionally, more stabilized flows (reduced variability) and increased fine‐grained deposition have enabled development and encroachment of vegetation onto the sand bars. Finally, human stresses, such as foot traffic and vehicular traffic may have interfered with burrowing, ovipositing, and foraging. The combination of these stress factors has most likely led to a reduction in source populations and, ultimately, the apparent extirpation of the entire metapopulation. Copyright © 2006 John Wiley & Sons, Ltd.     

Quantity,controls and functions of large woody debris in Midwestern USA streams

Large woody debris (LWD) can increase stream habitat heterogeneity by providing structure, altering flow patterns, enhancing sediment deposition, forming pools and retaining organic matter. In North America, the role of LWD has been studied extensively in streams of mature forests (e.g. Pacific Northwest), but few studies have assessed LWD in streams of younger forests (e.g. Midwestern USA). Our objectives were to: (1) quantify the volume and abundance of LWD in a set of Midwestern streams; (2) evaluate possible factors influencing LWD quantity; (3) identify the functional roles of LWD; and (4) compare LWD levels in the upper Midwest to those elsewhere in North America. In 2002 and 2003, we measured LWD and geomorphological variables in 15 low‐gradient streams draining previously logged watersheds in the Upper Peninsula of Michigan. Mean (±SE) LWD volume (0.77 ± 0.12 m³ 100 m⁻²) and abundance (33 ± 3 pieces 100 m⁻¹) were 71% and 10% lesser, respectively, than in streams of similar gradient elsewhere in North America. Channel shape (width:depth ratio) explained 30% of the variation in LWD volume (multiple stepwise regression, P = 0.015) while LWD length and length:channel width combined, explained 72% of the variation in LWD density (multiple stepwise regression, P < 0.0001). About 50% of the LWD either stored sediment or stabilized banks and 14% of the LWD formed pools, although pool density was not significantly related to LWD volume or density. LWD levels, overall, were low in upper Midwestern streams, but the relative importance of that LWD to ecosystem function may be magnified in these wood‐poor systems. Copyright © 2006 John Wiley & Sons, Ltd.     

Assessment of the value of rivers for Otters (Lutra lutra)

The British otter Lutra lutra L. requires good water quality, an adequate supply of fish and certain types of vegetation or cavities (holts) adjacent to water bodies for resting and breeding sites. In the U.K. otters and their holts are legally protected. Trained surveyors are needed to confirm the presence of otters on a river as the animals are rarely seen, but their tracks and droppings (spraints) may be detected. To evaluate a river for otters, information is required on water quality, fish species and biomass, as well as available habitat. Pioneer evaluation work based on the River Corridor Survey techniques has been done on Welsh rivers with good otter populations. Riparian vegetation, especially trees, is shown to be particularly important. This work is now being extended to areas on the margins of otter distribution such as the lower river Wye in England and Wales. Such surveys provide important management information for water authorities and give opportunities for enhancement work to benefit this animal.     

Salmonid observations at a Klamath River thermal refuge under various hydrological and meteorological conditions

The Beaver Creek confluence with the main‐stem Klamath River was studied to assess salmonid use in a thermal mixing zone under various summer hydrological and meteorological conditions. Main‐stem flow releases from Iron Gate Dam ranged from 17 cms (615 cfs) to 37 cms (1320 cfs) during the study period and main‐stem water temperatures ranged from 19.5 to 26°C. A grid was constructed to define the thermal refuge as a system of cells. Temperatures were monitored using remote temperature loggers and fish counts were conducted using daytime snorkelling. Most juvenile salmonids were observed moving into the refuge when main‐stem temperatures exceeded 22–23°C. Salmonids in the thermal refuge did not necessarily seek the coolest water, but were generally located in habitats commensurate with species‐specific behavioural needs within their thermal tolerance range. Such ranges largely occurred within refuge areas. Variable meteorological conditions confounded observable biological thermal benefit to fish resulting from higher or lower main‐stem flows. Thermal regime dynamics indicated that under the hydrological and meteorological conditions observed, higher flows from Iron Gate Dam showed some ability to change the structure of the refuge area. It appeared that without the thermal refuge, main‐stem flows alone could not sustain the salmonid population because high water temperatures usually exceeded their published thermal tolerance limits. Copyright © 2007 John Wiley & Sons, Ltd.     

Rainbow smelt population responses to species invasions and change in environmental condition

Invasive species can cause major disruptions in native food webs, yet the impact of species introductions and whether they will become invasive appears to be context-dependent. Rainbow smelt and alewife co-exist as invasive species in the Laurentian Great Lakes and as native species on the Atlantic coast of North America, but in Lake Champlain rainbow smelt is the dominant native forage fish and alewife are invasive. Alewife became abundant by 2007, providing an opportunity to explore the dynamics of these two species in a system where only one is invasive. We used data from a 28-year forage fish survey to compare demographics of rainbow smelt populations in three basins of Lake Champlain with different volumes, nutrient levels, and predator abundances. Rainbow smelt catch-per-unit-effort (CPUE) remained constant in the large, deep Main Lake before and after alewife invaded, but decreased in the two smaller basins. Declines were primarily a result of increased age-0 and age-1 mortality. Predation by top piscivores, system productivity, and competition for resources alone could not explain the patterns in CPUE across the basins. The mechanisms that allow alewife and rainbow smelt to co-exist could be related to system volume and oxythermal habitat availability, and may explain why the two species do not negatively affect each other in the Great Lakes. Summer hypoxia in the smaller basins could force individuals into smaller habitat volumes with higher densities of competitors and cannibalistic adult rainbow smelt. Habitat availability may mediate the impact of invasive alewife on native rainbow smelt.     

Developing habitat associations for fishes in Lake Winnipeg by linking large scale bathymetric and substrate data with fish telemetry detections

Understanding relationships between freshwater fishes and habitat is critical for effective fisheries and habitat management. Habitat suitability indices (HSI) are commonly used to describe fish–habitat associations in rivers and other freshwater ecosystems. When applied to large lakes however, standard sampling procedures are inadequate because of larger sampling areas and an increased risk of fish collection bias through one-time observations. Here, we use lake bathymetry, substrate, and multiple fish telemetry detections collected from a systematically deployed receiver grid to develop HSI for four fish species (lake sturgeon, freshwater drum, common carp, and walleye) in Lake Winnipeg. Seasonal variations in habitat use based on water depth and substrate were observed in three of four species. Lake sturgeon remained in shallow locations with predominantly gravel substrate near the mouth of the Winnipeg River regardless of season. Freshwater drum persisted over fine substrate in both summer and winter but had a broader depth range in the summer compared to winter. Common carp shifted from mid-range depths and silt substrate in the summer to shallow depths and gravel substrate in the winter. Walleye showed an unchanging association to fine substrate but expanded from primarily mid-range depths in the summer to include shallower depths in the winter. These findings show how multiple telemetry detections per fish can be combined with hydroacoustic data to provide informative habitat associations for fishes in a large lacustrine ecosystem.     

基于山区地质灾害危险性分区的建设用地适宜性评价

地质灾害是建设用地选址时考虑的关键因素之一,也是危险性区划的主要参考要素,其直接或间接危害到人类安全并给社会和经济建设造成重大损失。为了降低建设用地规划中地质灾害的影响,应将地质灾害危险性分区考虑到建设用地适宜性评价当中。以干旱河谷山区丹巴县为研究区,运用确定系数和逻辑回归相结合的方法,构建地质灾害危险性评价体系对该区进行地质灾害危险性分区。选择安全因子、自然因子、社会因子和生态因子共同构成建设用地适宜性评价指标体系,利用层次分析法对研究区进行建设用地适宜性评价。结果表明:(1)对丹巴县进行危险性分区,极高危险区217.20km2,高危险区744.95km2,中度危险区1352.44km2,低度危险区1295.08km2以及极低危险区875.32km2。(2)丹巴县建设用地最适宜区面积为115.72km2,占县域总面积的2.57%,适宜建设的土地少且多集中在小金川、革什扎河、东谷河和大渡河沿岸河谷地区。较适宜区、基本适宜区、较不适宜区和禁止建设区面积分别为683.47km2、623.21km2、590.66km2、2494.21km2。(3)已建成的城镇空间中38.50%和37.62%分布在最适宜区和较适宜区,整体分布状况良好。有5.85%的城镇空间建设在较不适宜区,2.67%在禁止建设区,存在生态安全风险,该区域应加强灾害预警与防灾减灾工作,有条件地适度搬迁。     

Population effect of a large‐scale stream restoration effort on Chinook salmon in the Pahsimeroi River,Idaho

Stream habitat restoration is an important tool for fisheries management in impaired lotic systems. Although small‐scale benefits of stream habitat restoration are commonly investigated, it is difficult to demonstrate population effects. The Pahsimeroi River Chinook salmon Oncorhynchus tshawytscha population was previously restricted to the lower portion of the river by multiple irrigation structures. To address fish passage issues, a combination of restoration projects was initiated including barrier removals, instream flow enhancements and installation of fish screens on diversions. The largest barrier was removed in 2009, more than doubling the amount of accessible linear habitat. We hypothesized restoration efforts would expand the distribution of spawning salmon in the Pahsimeroi River watershed, leading to a broader distribution of juveniles. We also hypothesized a broader juvenile distribution would have population effects by reducing the prevalence of density‐dependent growth and survival. Redds were documented in newly accessible habitat immediately following barrier removal and accounted for a median of 42% of all redds in the Pahsimeroi River watershed during 2009–2015. Snorkel surveys also documented juvenile rearing in newly accessible habitat. Juvenile productivity increased from a median of 64 smolts/female spawner for brood years 2002–2008 to 99 smolts/female spawner for brood years 2009–2014. Overall, results suggested increased habitat accessibility in the Pahsimeroi River broadened the distribution of spawning adult and rearing juvenile salmon and reduced the effects of density‐dependent survival. Large‐scale stream restoration efforts can have a population effect. Despite the large‐scale effort and response, habitat restoration alone is likely not sufficient to restore this population.